miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Cichorium intybus



ABOUT THIS RECORD

ID: MNEST000353
species: Cichorium intybus
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGTACGTGCT

miRNA*
CATATACCCTTACTCTCCATC

mismatches: 4
bulges: 0

View larger
pre-miRNA
AACGACTTCTTTTTGAAGATATGGTTCATGCTGGAGAAGCAGGGTACGTGCTAAATCCATGATGTGATTTAGCATATACCCTTACTCTCCATCTTGAATC
GGTTTCTTTAATTCTTCACAA


dot-bracket secondary structure
............(((((((..(((((((...((((((...((((((.((((((((((((...)).)))))))))).))))))...))))))...))))))
)...)))))))..........



SIMILARITIES
miRBase ptc-MIR164f: 0.000006

PMRD ptc-miR164f: 0.000006

microPC miR164: 0.00009
UniProt no hits

RFAM MIR164: 0.0001
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;